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. 2013 Feb;24(2):301-4.
doi: 10.1007/s13361-012-0516-6. Epub 2013 Jan 5.

Pyteomics--a Python framework for exploratory data analysis and rapid software prototyping in proteomics

Anton A Goloborodko  1 , Lev I Levitsky, Mark V Ivanov, Mikhail V Gorshkov
Affiliations

Pyteomics--a Python framework for exploratory data analysis and rapid software prototyping in proteomics

Anton A Goloborodko et al. J Am Soc Mass Spectrom. 2013 Feb.

Abstract

Pyteomics is a cross-platform, open-source Python library providing a rich set of tools for MS-based proteomics. It provides modules for reading LC-MS/MS data, search engine output, protein sequence databases, theoretical prediction of retention times, electrochemical properties of polypeptides, mass and m/z calculations, and sequence parsing. Pyteomics is available under Apache license; release versions are available at the Python Package Index http://pypi.python.org/pyteomics, the source code repository at http://hg.theorchromo.ru/pyteomics, documentation at http://packages.python.org/pyteomics. Pyteomics.biolccc documentation is available at http://packages.python.org/pyteomics.biolccc/. Questions on installation and usage can be addressed to pyteomics mailing list: pyteomics@googlegroups.com.

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References

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